8YWP

Deposited: 2024-03-31 Released: 2024-11-06
Deposition Author(s): Yudenko, A., Bukhdruker, S., Eliseev, I., Rodin, S., Burtseva, A., Petrov, A., Zlobina, O., Ischenko, A., Borshchevskiy, V.
Funding Organization(s): Ministry of Education and Science of the Russian Federation

Experimental Data Snapshot

Starting Model: experimental
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wwPDB Validation 3D Report Full Report

This is version 1.0 of the entry. See complete history.

Literature

(2025) Structure

Macromolecule Content

Macromolecules

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(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Heavy chain of the Fab fragment of anti-IL-6 antibody I9H	A [auth H]	231	Homo sapiens	Mutation(s): 0
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
Sequence Annotations Expand
Reference Sequence

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(by identity cutoff) | 3D Structure

Entity ID: 2
Molecule	Chains	Sequence Length	Organism	Details	Image
Light chain of the Fab fragment of anti-IL-6 antibody I9H	B [auth L]	214	Homo sapiens	Mutation(s): 0
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
Sequence Annotations Expand
Reference Sequence

Small Molecules

Ligands 2 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
PGE Query on PGE Download Ideal Coordinates CCD File SDF format, chain D [auth L] MOL2 format, chain D [auth L] mmCIF format, chain D [auth L]	D [auth L]	TRIETHYLENE GLYCOL C₆ H₁₄ O₄ ZIBGPFATKBEMQZ-UHFFFAOYSA-N		Interactions Focus chain D [auth L] Interactions & Density Focus chain D [auth L]
GOL Query on GOL Download Ideal Coordinates CCD File SDF format, chain C [auth L] SDF format, chain E [auth L] MOL2 format, chain C [auth L] MOL2 format, chain E [auth L] mmCIF format, chain C [auth L] mmCIF format, chain E [auth L]	C [auth L], E [auth L]	GLYCEROL C₃ H₈ O₃ PEDCQBHIVMGVHV-UHFFFAOYSA-N		Interactions Focus chain C [auth L] Focus chain E [auth L] Interactions & Density Focus chain C [auth L] Focus chain E [auth L]