Ligand validation:5KWY


NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 5KWY designated by the RCSB


Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5KWY_NAG_C_201Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5KWY_NAG_C_201Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
5KWY_NAG_C_201 58% 82% 0.159 0.9370.26 0.54 - -00100%0.9333
5KWY_NAG_D_201 55% 85% 0.171 0.9410.31 0.43 - -00100%0.9333
5KWY_NAG_D_202 23% 81% 0.216 0.8360.29 0.52 - -00100%0.9333
5KWY_NAG_C_202 8% 56% 0.246 0.7160.41 1.27 - 100100%0.9333
3H0C_NAG_A_794 100% 56% 0.021 0.9950.61 1.08 - 100100%0.9333
5LDS_NAG_B_1007 100% 67% 0.022 0.9950.48 0.79 - -00100%0.9333
5O5D_NAG_A_601 100% 65% 0.022 0.9940.32 0.99 - 100100%0.9333
6MUG_NAG_G_629 100% 76% 0.022 0.9940.35 0.58 - -00100%0.9333
3GXM_NAG_A_498 100% 45% 0.026 0.9920.75 1.34 - 200100%0.9333