UDP: URIDINE-5'-DIPHOSPHATE
UDP is a Ligand Of Interest in 3EIC designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 3EIC_UDP_D_164 | 88% | 35% | 0.092 | 0.967 | 0.88 | 1.65 | 1 | 6 | 0 | 0 | 100% | 1 |
| 3EIC_UDP_E_165 | 86% | 39% | 0.091 | 0.961 | 0.9 | 1.45 | - | 5 | 0 | 0 | 100% | 1 |
| 3EIC_UDP_A_161 | 84% | 35% | 0.098 | 0.96 | 0.89 | 1.66 | - | 5 | 1 | 0 | 100% | 1 |
| 3EIC_UDP_C_163 | 80% | 38% | 0.101 | 0.949 | 0.85 | 1.56 | 1 | 5 | 0 | 0 | 100% | 1 |
| 3EIC_UDP_B_162 | 78% | 40% | 0.119 | 0.961 | 0.88 | 1.43 | - | 4 | 1 | 0 | 100% | 1 |
| 3EIC_UDP_F_166 | 59% | 37% | 0.146 | 0.929 | 0.92 | 1.52 | 1 | 5 | 0 | 0 | 100% | 1 |
| 3FCW_UDP_D_138 | 78% | 35% | 0.124 | 0.968 | 0.92 | 1.61 | - | 6 | 1 | 0 | 100% | 1 |
| 3FBB_UDP_D_201 | 75% | 38% | 0.12 | 0.952 | 0.89 | 1.54 | - | 5 | 0 | 0 | 100% | 1 |
| 8X3Q_UDP_C_401 | 100% | 3% | 0.015 | 0.998 | 3.32 | 2.69 | 13 | 13 | 0 | 0 | 100% | 1 |
| 8X3U_UDP_B_401 | 100% | 3% | 0.012 | 0.999 | 3.31 | 2.68 | 13 | 13 | 2 | 0 | 100% | 1 |
| 8VH8_UDP_B_704 | 100% | 61% | 0.03 | 0.994 | 0.59 | 0.91 | - | 1 | 0 | 0 | 100% | 1 |
| 2B69_UDP_A_900 | 100% | 42% | 0.032 | 0.992 | 1.03 | 1.21 | 2 | 4 | 0 | 0 | 100% | 1 |
| 4GYW_UDP_C_1101 | 100% | 37% | 0.037 | 0.988 | 1.03 | 1.45 | 2 | 4 | 0 | 0 | 100% | 1 |
