8GV5

Crystal structure of PN-SIA28 in complex with influenza hemagglutinin A/swine/Guangdong/104/2013 (H1N1)


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AHemagglutinin_1ste8gv5A1 A: beta sandwichesX: jelly-rollH: Viral protein domain (From Topology)T: Viral protein domainF: Hemagglutinin_1stECOD (1.6)
BHemagglutinin_2nde8gv5B1 A: alpha bundlesX: Hemagglutinin HA2 chain (From Topology)H: Hemagglutinin HA2 chain (From Topology)T: Hemagglutinin HA2 chainF: Hemagglutinin_2ndECOD (1.6)
CV-set_12e8gv5C1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: V-set_12ECOD (1.6)
DV-sete8gv5D1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: V-setECOD (1.6)

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
Heavy ChainIGHV3 -hemagglutinin ha2 chain | hemagglutinin ha1 chainSAbDab (2024-12-06)
Light ChainIGKV1 Kappahemagglutinin ha2 chain | hemagglutinin ha1 chainSAbDab (2024-12-06)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00509Haemagglutinin (Hemagglutinin)Haemagglutinin- Family
PF00509Haemagglutinin (Hemagglutinin)Haemagglutinin- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Hemagglutinin HA1 chain
Hemagglutinin HA2 chain
PN-SIA28 Heavy chain---
PN-SIA28 Light Chain---