4N0I
Crystal structure of S. cerevisiae mitochondrial GatFAB in complex with glutamine
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | Amidase signature (AS) enzymes | 8099089 | 4002446 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Amidase signature (AS) enzymes | 8099090 | 3001251 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | Glutamine synthetase/guanido kinase | 8098632 | 3000676 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Amidase | e4n0iA1 | A: a/b three-layered sandwiches | X: Amidase signature (AS) enzymes (From Topology) | H: Amidase signature (AS) enzymes (From Topology) | T: Amidase signature (AS) enzymes | F: Amidase | ECOD (1.6) |
C [auth F] | gatC_like | e4n0iF1 | A: extended segments | X: Glu-tRNAGln amidotransferase C subunit (From Topology) | H: Glu-tRNAGln amidotransferase C subunit (From Topology) | T: Glu-tRNAGln amidotransferase C subunit | F: gatC_like | ECOD (1.6) |
B | GatB_N | e4n0iB1 | A: a+b two layers | X: Glutamine synthetase-like | H: Glutamine synthetase/guanido kinase (From Topology) | T: Glutamine synthetase/guanido kinase | F: GatB_N | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.90.1300.10 | Alpha Beta | Alpha-Beta Complex | Amidase signature (AS) enzymes | Amidase signature (AS) domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
C [auth F] | PF20977 | Glutamyl-tRNA(Gln) amidotransferase subunit F (GatF) | Glutamyl-tRNA(Gln) amidotransferase subunit F | - | Family |
PF02934 | GatB/GatE catalytic domain (GatB_N) | GatB/GatE catalytic domain | This domain is found in the GatB and GatE proteins [1]. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR036928 | Amidase signature (AS) superfamily | Homologous Superfamily | |
IPR004412 | Glutamyl-tRNA(Gln) amidotransferase A subunit | Family | |
IPR000120 | Amidase | Family | |
IPR023631 | Amidase signature domain | Domain | |
IPR020556 | Amidase, conserved site | Conserved Site | |
C [auth F] | IPR027499 | Glutamyl-tRNA(Gln) amidotransferase subunit F, mitochondrial | Family |
IPR006075 | Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic | Domain | |
IPR003789 | Aspartyl/glutamyl-tRNA amidotransferase subunit B-like | Homologous Superfamily | |
IPR017959 | Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E | Family | |
IPR023168 | Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 | Homologous Superfamily | |
IPR018027 | Asn/Gln amidotransferase | Domain | |
IPR017958 | Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site | Conserved Site | |
IPR004413 | Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B | Family | |
IPR014746 | Glutamine synthetase/guanido kinase, catalytic domain | Homologous Superfamily |