3O8E
Structure of extracelllar portion of CD46 in complex with Adenovirus type 11 knob
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d3o8ea_ | All beta proteins | Virus attachment protein globular domain | Virus attachment protein globular domain | Adenovirus fiber protein 'knob' domain | automated matches | (Human adenovirus 11 ) [TaxId: 10541 ], | SCOPe (2.08) |
C | d3o8ec_ | All beta proteins | Virus attachment protein globular domain | Virus attachment protein globular domain | Adenovirus fiber protein 'knob' domain | automated matches | (Human adenovirus 11 ) [TaxId: 10541 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Virus attachment protein globular domain | 8099946 | 3001376 | SCOP2B (2022-06-29) |
C | SCOP2 Family | Adenovirus fiber protein knob domain | 8099945 | 4002523 | SCOP2 (2022-06-29) |
C | SCOP2 Superfamily | Virus attachment protein globular domain | 8099946 | 3001376 | SCOP2 (2022-06-29) |
D | SCOP2B Superfamily | Sushi/CCP/SCR domain | 8043390 | 3000902 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Sushi/CCP/SCR domain | 8043389 | 3000902 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Sushi/CCP/SCR domain | 8043390 | 3000902 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Sushi/CCP/SCR domain | 8043389 | 3000902 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Adeno_knob | e3o8eA1 | A: beta sandwiches | X: Domain in virus attachment proteins (From Topology) | H: Domain in virus attachment proteins (From Topology) | T: Domain in virus attachment proteins | F: Adeno_knob | ECOD (1.6) |
C | Adeno_knob | e3o8eC1 | A: beta sandwiches | X: Domain in virus attachment proteins (From Topology) | H: Domain in virus attachment proteins (From Topology) | T: Domain in virus attachment proteins | F: Adeno_knob | ECOD (1.6) |
D | Sushi_4 | e3o8eD2 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: Complement control module/SCR domain | F: Sushi_4 | ECOD (1.6) |
D | Sushi | e3o8eD1 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: Complement control module/SCR domain | F: Sushi | ECOD (1.6) |
B | Sushi_4 | e3o8eB2 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: Complement control module/SCR domain | F: Sushi_4 | ECOD (1.6) |
B | Sushi | e3o8eB4 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: Complement control module/SCR domain | F: Sushi | ECOD (1.6) |
B | Sushi_3 | e3o8eB3 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: Complement control module/SCR domain | F: Sushi_3 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.60.90.10 | Mainly Beta | Sandwich | Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) | Adenovirus pIV-related, attachment domain | CATH (4.3.0) |
C | 2.60.90.10 | Mainly Beta | Sandwich | Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) | Adenovirus pIV-related, attachment domain | CATH (4.3.0) |
D | 2.10.70.10 | Mainly Beta | Ribbon | Complement Module | domain 1 | CATH (4.3.0) |
B | 2.10.70.10 | Mainly Beta | Ribbon | Complement Module | domain 1 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00084 | Sushi repeat (SCR repeat) (Sushi) | Sushi repeat (SCR repeat) | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR009013 | Attachment protein shaft domain superfamily | Homologous Superfamily | |
IPR000978 | Adenoviral fibre protein, knob | Domain | |
IPR008982 | Adenovirus pIV-like, attachment domain | Homologous Superfamily | |
IPR000931 | Adenovirus fibre protein | Family | |
IPR000939 | Adenoviral fibre protein, repeat/shaft region | Repeat | |
IPR017341 | Membrane cofactor protein CD46 | Family | |
IPR000436 | Sushi/SCR/CCP domain | Domain | |
IPR035976 | Sushi/SCR/CCP superfamily | Homologous Superfamily | |
IPR050350 | Complement & Cell Adhesion Regulators | Family |