1MAL
STRUCTURAL BASIS FOR SUGAR TRANSLOCATION THROUGH MALTOPORIN CHANNELS AT 3.1 ANGSTROMS RESOLUTION
External Resource: Annotation
- Domain Annotation: SCOP/SCOPe Classification
- Domain Annotation: SCOP2 Classification
- Domain Annotation: ECOD Classification
- Domain Annotation: CATH
- Protein Family Annotation
- Gene Ontology: Gene Product Annotation
- InterPro: Protein Family Classification
- Membrane Protein Annotation: PDBTM
- Membrane Protein Annotation: MemProtMD
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | d1malb_ | Membrane and cell surface proteins and peptides | Transmembrane beta-barrels | Porins | Maltoporin-like | Maltoporin (also LamB protein) | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
C | d1malc_ | Membrane and cell surface proteins and peptides | Transmembrane beta-barrels | Porins | Maltoporin-like | Maltoporin (also LamB protein) | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
A | d1mala_ | Membrane and cell surface proteins and peptides | Transmembrane beta-barrels | Porins | Maltoporin-like | Maltoporin (also LamB protein) | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | LamB | e1malB1 | A: beta barrels | X: Outer membrane meander beta-barrels | H: Porins | T: Maltoporin-like | F: LamB | ECOD (1.6) |
C | LamB | e1malC1 | A: beta barrels | X: Outer membrane meander beta-barrels | H: Porins | T: Maltoporin-like | F: LamB | ECOD (1.6) |
A | LamB | e1malA1 | A: beta barrels | X: Outer membrane meander beta-barrels | H: Porins | T: Maltoporin-like | F: LamB | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B | 2.40.170.10 | Mainly Beta | Beta Barrel | Maltoporin | Chain A | CATH (4.3.0) |
C | 2.40.170.10 | Mainly Beta | Beta Barrel | Maltoporin | Chain A | CATH (4.3.0) |
A | 2.40.170.10 | Mainly Beta | Beta Barrel | Maltoporin | Chain A | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF02264 | LamB porin (LamB) | LamB porin | Maltoporin (LamB protein) forms a trimeric structure which facilitates the diffusion of maltodextrins across the outer membrane of Gram-negative bacteria. The membrane channel is formed by an antiparallel beta-barrel [1]. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR050286 | Gram-negative Bacterial Carbohydrate Uptake Porin | Family | |
IPR003192 | Porin, LamB-type | Family | |
IPR023738 | Maltoporin | Family | |
IPR036998 | Porin, LamB-type superfamily | Homologous Superfamily |
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
Chains | External Link | Comment |
---|---|---|
PDBTM | Annotated as membrane protein by PDBTM |
Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage
Chains | External Link | Comment |
---|---|---|
MemProtMD | Annotated as membrane protein by MemProtMD |