Download MendeleyRadiation damage in protein structural characterization by Synchrotron Radiation: State of the art and Nanotechnology-based perspective
Pechkova, E., Tripathi, S., Nicolini, C.To be published.
3E0A
Thaumatin by Classical hanging drop method after high X-Ray dose on ESRF ID29 beamline
- PDB DOI: https://doi.org/10.2210/pdb3E0A/pdb
- Classification: PLANT PROTEIN
- Organism(s): Thaumatococcus daniellii
- Mutation(s): No
- Deposited: 2008-07-31 Released: 2009-07-07
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.51 Å
- R-Value Free: 0.181
- R-Value Work: 0.154
- R-Value Observed: 0.155
Starting Model: experimental
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wwPDB Validation 3D Report Full Report
This is version 1.3 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Thaumatin-1 | 207 | Thaumatococcus daniellii | Mutation(s): 0 |  | |
UniProt | |||||
Find proteins for P02883 (Thaumatococcus daniellii) Explore P02883 Go to UniProtKB: P02883 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P02883 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| TLA Query on TLA | B [auth A] | L(+)-TARTARIC ACID C4 H6 O6 FEWJPZIEWOKRBE-JCYAYHJZSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.51 Å
- R-Value Free: 0.181
- R-Value Work: 0.154
- R-Value Observed: 0.155
- Space Group: P 41 21 2
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 57.926 | α = 90 |
| b = 57.926 | β = 90 |
| c = 150.687 | γ = 90 |
| Software Name | Purpose |
|---|---|
| MOSFLM | data reduction |
| SCALA | data scaling |
| REFMAC | refinement |
| PDB_EXTRACT | data extraction |
Entry History
Deposition Data
- Released Date: 2009-07-07 Deposition Author(s): Tripathi, S., Pechkova, E., Nicolini, C.
Revision History (Full details and data files)
- Version 1.0: 2009-07-07
Type: Initial release - Version 1.1: 2011-07-13
Changes: Version format compliance - Version 1.2: 2023-11-01
Changes: Data collection, Database references, Derived calculations, Refinement description - Version 1.3: 2024-11-20
Changes: Structure summary
