NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE
NAD is a Ligand Of Interest in 2VYV designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
2VYV_NAD_D_1340 | 56% | 25% | 0.145 | 0.915 | 1.82 | 1.23 | 4 | 1 | 3 | 0 | 100% | 1 |
2VYV_NAD_A_1333 | 47% | 26% | 0.164 | 0.903 | 1.83 | 1.17 | 4 | 4 | 0 | 0 | 100% | 1 |
2VYV_NAD_B_1334 | 38% | 27% | 0.181 | 0.881 | 1.75 | 1.21 | 4 | 2 | 0 | 0 | 100% | 1 |
2VYV_NAD_C_1332 | 19% | 28% | 0.229 | 0.82 | 1.77 | 1.15 | 4 | 2 | 2 | 0 | 100% | 1 |
2VYN_NAD_D_1341 | 97% | 26% | 0.064 | 0.98 | 1.69 | 1.32 | 4 | 3 | 1 | 0 | 100% | 1 |
3CMC_NAD_O_407 | 100% | 18% | 0.022 | 0.996 | 1.63 | 1.92 | 4 | 9 | 0 | 0 | 100% | 1 |
4RQU_NAD_B_403 | 100% | 3% | 0.019 | 0.997 | 3.51 | 2.61 | 13 | 18 | 0 | 0 | 100% | 1 |
3EC7_NAD_A_400 | 100% | 18% | 0.025 | 0.995 | 1.8 | 1.74 | 5 | 8 | 1 | 0 | 100% | 1 |
4URF_NAD_A_1249 | 100% | 44% | 0.034 | 0.995 | 0.96 | 1.2 | 2 | 4 | 0 | 0 | 100% | 1 |
2C5A_NAD_B_1374 | 100% | 23% | 0.039 | 0.992 | 1.34 | 1.84 | 6 | 7 | 1 | 0 | 100% | 1 |