TPP: THIAMINE DIPHOSPHATE
TPP is a Ligand Of Interest in 2VK1 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 2VK1_TPP_D_600 | 97% | 25% | 0.068 | 0.983 | 1.54 | 1.49 | 6 | 4 | 0 | 0 | 100% | 1 |
| 2VK1_TPP_C_600 | 93% | 20% | 0.086 | 0.981 | 1.85 | 1.52 | 6 | 5 | 1 | 0 | 100% | 1 |
| 2VK1_TPP_A_600 | 92% | 23% | 0.092 | 0.984 | 1.72 | 1.46 | 4 | 4 | 0 | 0 | 100% | 1 |
| 2VK1_TPP_B_600 | 92% | 32% | 0.09 | 0.979 | 1.17 | 1.51 | 2 | 4 | 1 | 0 | 100% | 1 |
| 1PVD_TPP_B_557 | 99% | 14% | 0.06 | 0.989 | 1.78 | 2.11 | 6 | 10 | 0 | 0 | 100% | 1 |
| 2W93_TPP_C_600 | 99% | 27% | 0.058 | 0.986 | 1.52 | 1.42 | 4 | 5 | 6 | 0 | 100% | 1 |
| 1QPB_TPP_B_600 | 96% | 7% | 0.08 | 0.987 | 3.09 | 1.73 | 8 | 9 | 2 | 0 | 100% | 1 |
| 2VK8_TPP_C_1564 | 95% | 25% | 0.077 | 0.982 | 1.7 | 1.35 | 6 | 5 | 0 | 0 | 100% | 0.9627 |
| 2AG1_TPP_C_622 | 100% | 1% | 0.019 | 0.998 | 6.24 | 1.97 | 6 | 9 | 1 | 0 | 100% | 1 |
| 9BT4_TPP_D_302 | 100% | 49% | 0.02 | 0.997 | 1.07 | 0.92 | 2 | 2 | 1 | 0 | 100% | 1 |
| 4KXW_TPP_A_1015 | 100% | 39% | 0.032 | 0.998 | 1.23 | 1.16 | 2 | 4 | 1 | 0 | 100% | 1 |
| 4KGD_TPP_A_704 | 100% | 22% | 0.035 | 0.997 | 1.74 | 1.51 | 4 | 7 | 0 | 0 | 100% | 0.97 |
| 4MPJ_TPP_A_604 | 100% | 28% | 0.031 | 0.991 | 1.34 | 1.53 | 3 | 6 | 0 | 0 | 100% | 1 |
