6MKV
Crystal structure of Retinal-bound holo Q108K:K40L:T51W domain-swapped dimer of human cellular retinol binding protein 2
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d6mkva_ | All beta proteins | Lipocalins | Lipocalins | Fatty acid binding protein-like | automated matches | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
C | d6mkvc_ | All beta proteins | Lipocalins | Lipocalins | Fatty acid binding protein-like | automated matches | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
D | d6mkvd_ | All beta proteins | Lipocalins | Lipocalins | Fatty acid binding protein-like | automated matches | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
B | d6mkvb_ | All beta proteins | Lipocalins | Lipocalins | Fatty acid binding protein-like | automated matches | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Lipocalins | 8062823 | 3001332 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Lipocalins | 8062823 | 3001332 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Lipocalins | 8062823 | 3001332 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Lipocalins | 8062823 | 3001332 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Lipocalin_7 | e6mkvA1 | A: beta barrels | X: Lipocalins/Streptavidin | H: Lipocalins (From Topology) | T: Lipocalins | F: Lipocalin_7 | ECOD (1.6) |
C | Lipocalin_7 | e6mkvC1 | A: beta barrels | X: Lipocalins/Streptavidin | H: Lipocalins (From Topology) | T: Lipocalins | F: Lipocalin_7 | ECOD (1.6) |
D | Lipocalin_7 | e6mkvD1 | A: beta barrels | X: Lipocalins/Streptavidin | H: Lipocalins (From Topology) | T: Lipocalins | F: Lipocalin_7 | ECOD (1.6) |
B | Lipocalin_7 | e6mkvB1 | A: beta barrels | X: Lipocalins/Streptavidin | H: Lipocalins (From Topology) | T: Lipocalins | F: Lipocalin_7 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.40.128.20 | Mainly Beta | Beta Barrel | Lipocalin | Calycin beta-barrel core domain | CATH (utative) |
C | 2.40.128.20 | Mainly Beta | Beta Barrel | Lipocalin | Calycin beta-barrel core domain | CATH (utative) |
D | 2.40.128.20 | Mainly Beta | Beta Barrel | Lipocalin | Calycin beta-barrel core domain | CATH (utative) |
B | 2.40.128.20 | Mainly Beta | Beta Barrel | Lipocalin | Calycin beta-barrel core domain | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00061 | Lipocalin / cytosolic fatty-acid binding protein family (Lipocalin) | Lipocalin / cytosolic fatty-acid binding protein family | Lipocalins are transporters for small hydrophobic molecules, such as lipids, steroid hormones, bilins, and retinoids. The family also encompasses the enzyme prostaglandin D synthase (EC:5.3.99.2). Alignment subsumes both the lipocalin and fatty acid ... | Domain |