5UXY

The crystal structure of a DegV family protein from Eubacterium eligens loaded with heptadecanoic acid to 1.80 Angstrom resolution (ALTERNATIVE REFINEMENT OF PDB 3FDJ with HEPTADECANOIC acid)

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad5uxya_ Alpha and beta proteins (a/b) DAK1/DegV-like DAK1/DegV-like automated matches automated matches (Lachnospira eligens ) [TaxId: 39485 ], SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ADegV_Ce5uxyA2 A: a+b three layersX: Bacillus chorismate mutase-likeH: DAK1/DegV C-terminal domain (From Topology)T: DAK1/DegV C-terminal domainF: DegV_CECOD (1.6)
ADegV_Ne5uxyA1 A: a/b three-layered sandwichesX: EDD domain (From Topology)H: EDD domain (From Topology)T: EDD domainF: DegV_NECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.40.50.10440 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Dihydroxyacetone kinaseCATH (4.3.0)
A2.20.28.50 Mainly Beta Single Sheet Rubrerythrin, domain 2 DegV, N-terminal domain, peripheral subdomainCATH (4.3.0)
A3.30.1180.10 Alpha Beta 2-Layer Sandwich Hypothetical Protein Tm841 Chain: ACATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF02645Uncharacterised protein, DegV family COG1307 (DegV)Uncharacterised protein, DegV family COG1307- Family

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR050270DegV domain-containingFamily
IPR003797DegVFamily
IPR043168DegV, C-terminal domainHomologous Superfamily