Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Bd4ei5b_ All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain-like) beta2-microglobulin mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Fd4ei5f_ All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain-like) beta2-microglobulin mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Cd4ei5c2 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain-like) automated matches mouse (Mus musculus ) [TaxId: 10090 ], human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Cd4ei5c1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin automated matches automated matches mouse (Mus musculus ) [TaxId: 10090 ], human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Gd4ei5g1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin automated matches automated matches mouse (Mus musculus ) [TaxId: 10090 ], human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Dd4ei5d1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin automated matches automated matches mouse (Mus musculus ) [TaxId: 10090 ], human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Hd4ei5h1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin automated matches automated matches mouse (Mus musculus ) [TaxId: 10090 ], human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Ed4ei5e2 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin automated matches automated matches mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Ed4ei5e1 Alpha and beta proteins (a+b) MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain CD1, alpha-1 and alpha-2 domains mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Ed4ei5e3 Artifacts Tags Tags Tags C-terminal Tags mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2B SuperfamilyImmunoglobulin (Ig) domain-like 8054571 3000071 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyImmunoglobulin (Ig) domain-like 8054571 3000071 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyMHC antigen-recognition domain 8037146 3000521 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyImmunoglobulin (Ig) domain-like 8054657 3000071 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyMHC antigen-recognition domain 8037146 3000521 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyImmunoglobulin (Ig) domain-like 8054657 3000071 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BC1-set_2e4ei5B1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: C1-set_2ECOD (1.6)
FC1-set_2e4ei5F1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: C1-set_2ECOD (1.6)
CDUF1968e4ei5C2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: DUF1968ECOD (1.6)
CV-set_6e4ei5C1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: V-set_6ECOD (1.6)
GDUF1968e4ei5G3 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: DUF1968ECOD (1.6)
GV-set_6e4ei5G4 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: V-set_6ECOD (1.6)
DC1-sete4ei5D3 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: C1-setECOD (1.6)
DV-set_3e4ei5D4 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: V-set_3ECOD (1.6)
HC1-sete4ei5H3 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: C1-setECOD (1.6)
HV-set_3e4ei5H4 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: V-set_3ECOD (1.6)
AC1-set_2e4ei5A4 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: C1-set_2ECOD (1.6)
AMHC_Ie4ei5A3 A: a+b two layersX: MHC antigen-recognition domain (From Topology)H: MHC antigen-recognition domain (From Topology)T: MHC antigen-recognition domainF: MHC_IECOD (1.6)
EC1-set_2e4ei5E4 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: C1-set_2ECOD (1.6)
EMHC_Ie4ei5E3 A: a+b two layersX: MHC antigen-recognition domain (From Topology)H: MHC antigen-recognition domain (From Topology)T: MHC antigen-recognition domainF: MHC_IECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

IMGT Antibody Annotation IMGT Database Homepage

ChainProtein NameDescriptionOrganism NameGene Allele Name(s)Domain Name(s)Receptor TypeReceptor DescriptionProvenance Source
B, F
CD1D1 B2M Mus musculus (house mouse) B2M*01 C-LIKE-DOMAIN C-LIKE RPI-MH1Like MH1LIKE-ALPHA-LIKE_B2M IMGT (202448-0)
C, G
TR XV19 Type II NKT TRAV7D-4*01-TRAJ26*01, TARBV3*01 TR-ALPHA Chimeric (chimeric) TRAV7D-4*01, TRAV7D-4*02, TRAV7-4*02, TRAJ26*01, TRAC*01 V-DOMAIN V-ALPHA, C-DOMAIN C-ALPHA TR TR-ALPHA_BETA-2 IMGT (202448-0)
D, H
TR XV19 Type II NKT TRAV7D-4*01-TRAJ26*01, TARBV3*01 TR-BETA-2 Chimeric (chimeric) TRBV3*01, TRBJ2-1*01, TRBC2*01, TRBC2*02 V-DOMAIN V-BETA, C-DOMAIN C-BETA-2 TR TR-ALPHA_BETA-2 IMGT (202448-0)
A, E
CD1D1 I-ALPHA-LIKE Mus musculus (house mouse) CD1D1*01 G-DOMAIN G-ALPHA1-LIKE, G-DOMAIN G-ALPHA2-LIKE RPI-MH1Like MH1LIKE-ALPHA-LIKE_B2M IMGT (202448-0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
B, F
PF07654Immunoglobulin C1-set domain (C1-set)Immunoglobulin C1-set domain- Domain
A, E
PF07654Immunoglobulin C1-set domain (C1-set)Immunoglobulin C1-set domain- Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
B, F
Beta-2-microglobulin
C, G
Valpha1 XV19 Type II Natural Killer T cell receptor (mouse variable domain, human constant domain)---
D, H
Vbeta16 XV19 Type II Natural Killer T cell receptor (mouse variable domain, human constant domain)---
A, E
Antigen-presenting glycoprotein CD1d1